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Package: r-cran-ddrtree (0.1.5-2)

GNU R learning principal graphs with DDRTree

Provides an implementation of the framework of reversed graph embedding (RGE) which projects data into a reduced dimensional space while constructs a principal tree which passes through the middle of the data simultaneously. DDRTree shows superiority to alternatives (Wishbone, DPT) for inferring the ordering as well as the intrinsic structure of the single cell genomics data. In general, it could be used to reconstruct the temporal progression as well as bifurcation structure of any datatype.

Other Packages Related to r-cran-ddrtree

  • depends
  • recommends
  • suggests
  • dep: libc6 (>= 2.29)
    GNU C Library: Shared libraries
    also a virtual package provided by libc6-udeb
  • dep: libgcc-s1 (>= 4.0)
    GCC support library
  • dep: libstdc++6 (>= 5.2)
    GNU Standard C++ Library v3
  • dep: r-api-4.0
    virtual package provided by r-base-core
  • dep: r-base-core (>= 4.0.2-1build1)
    GNU R core of statistical computation and graphics system
  • dep: r-cran-bh
    (Virtual) GNU R package to provide BH
  • dep: r-cran-irlba
    GNU R fast truncated SVD, PCA and symmetric eigendecomposition
  • dep: r-cran-rcpp
    GNU R package for Seamless R and C++ Integration
  • dep: r-cran-rcppeigen
    GNU R package for Eigen templated linear algebra

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amd64 150.4 kB409 kB [list of files]
arm64 135.1 kB362 kB [list of files]
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ppc64el 171.2 kB522 kB [list of files]