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Package: bcalm (2.2.3-2)

de Bruijn compaction in low memory

A bioinformatics tool for constructing the compacted de Bruijn graph from sequencing data.

This is the parallel version of the BCALM software using gatb-core library.

Other Packages Related to bcalm

  • depends
  • recommends
  • suggests
  • dep: libc6 (>= 2.34)
    GNU C Library: Shared libraries
    also a virtual package provided by libc6-udeb
  • dep: libgatbcore3 (>= 1.4.2) [amd64]
    dynamic library of the Genome Analysis Toolbox
    dep: libgatbcore3 (>= 1.4.2+dfsg) [not amd64]
  • dep: libgcc-s1 (>= 3.3.1)
    GCC support library
  • dep: libhdf5-103-1
    HDF5 C runtime files - serial version
  • dep: libstdc++6 (>= 5.2)
    GNU Standard C++ Library v3

Download bcalm

Download for all available architectures
Architecture Package Size Installed Size Files
amd64 36.8 kB123 kB [list of files]
arm64 35.9 kB119 kB [list of files]
ppc64el 34.5 kB143 kB [list of files]