Package: changeo (1.2.0-1)
Links for changeo
Trisquel Resources:
Download Source Package changeo:
- [changeo_1.2.0-1.dsc]
- [changeo_1.2.0.orig-debian-tests-data.tar.gz]
- [changeo_1.2.0.orig.tar.gz]
- [changeo_1.2.0-1.debian.tar.xz]
Maintainer:
Original Maintainers:
- Debian Med Packaging Team (Mail Archive)
- Steffen Moeller
- Nilesh Patra
External Resources:
- Homepage [changeo.readthedocs.io]
Similar packages:
Repertoire clonal assignment toolkit (Python 3)
Change-O is a collection of tools for processing the output of V(D)J alignment tools, assigning clonal clusters to immunoglobulin (Ig) sequences, and reconstructing germline sequences.
Dramatic improvements in high-throughput sequencing technologies now enable large-scale characterization of Ig repertoires, defined as the collection of trans-membrane antigen-receptor proteins located on the surface of B cells and T cells. Change-O is a suite of utilities to facilitate advanced analysis of Ig and TCR sequences following germline segment assignment. Change-O handles output from IMGT/HighV-QUEST and IgBLAST, and provides a wide variety of clustering methods for assigning clonal groups to Ig sequences. Record sorting, grouping, and various database manipulation operations are also included.
This package installs the library for Python 3.
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Download changeo
| Architecture | Package Size | Installed Size | Files |
|---|---|---|---|
| all | 111.0 kB | 693 kB | [list of files] |