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Package: fml-asm (0.1+git20190320.b499514-1)

tool for assembling Illumina short reads in small regions

Fml-asm is a command-line tool for assembling Illumina short reads in regions from 100bp to 10 million bp in size, based on the fermi-lite library. It is largely a light-weight in-memory version of fermikit without generating any intermediate files. It inherits the performance, the relatively small memory footprint and the features of fermikit. In particular, fermi-lite is able to retain heterozygous events and thus can be used to assemble diploid regions for the purpose of variant calling.

Other Packages Related to fml-asm

  • depends
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  • dep: libc6 (>= 2.14) [amd64]
    GNU C Library: Shared libraries
    also a virtual package provided by libc6-udeb
    dep: libc6 (>= 2.17) [arm64, ppc64el]
    dep: libc6 (>= 2.7) [armhf]
  • dep: zlib1g (>= 1:1.1.4)
    compression library - runtime

Download fml-asm

Download for all available architectures
Architecture Package Size Installed Size Files
amd64 66.8 kB159 kB [list of files]
arm64 61.1 kB143 kB [list of files]
armhf 66.1 kB118 kB [list of files]
ppc64el 75.8 kB211 kB [list of files]