Package: idseq-bench (0.0~git20210602.27fb6dc-1)

Links for idseq-bench

Trisquel Resources:

Download Source Package idseq-bench:

Maintainer:

Debian Med Packaging Team (Mail Archive)

Original Maintainers:

Debian Med Packaging Team (Mail Archive)
Sao I Kuan

External Resources:

Homepage [github.com]

Similar packages:

Benchmark generator for the IDseq Portal

IDseq (Infectious Disease Sequencing Platform) is an unbiased global software platform that helps scientists identify pathogens in metagenomic sequencing data.

 * Discover - Identify the pathogen landscape
 * Detect - Monitor and review potential outbreaks
 * Decipher - Find potential infecting organisms in large datasets

This package provides the benchmark generator for the IDseq Portal.

Other Packages Related to idseq-bench

depends

recommends

suggests

dep: insilicoseq

sequencing simulator producing realistic Illumina reads
dep: ncbi-acc-download

download genome files from NCBI by accession
dep: python3

interactive high-level object-oriented language (default python3 version)
dep: python3-numpy

Fast array facility to the Python 3 language
dep: python3-sklearn

Python modules for machine learning and data mining - Python 3
dep: python3-smart-open

utils for streaming large files

Download idseq-bench

Download for all available architectures
Architecture	Package Size	Installed Size	Files
all	24.1 kB	94 kB	[list of files]

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