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[ Source: microbiomeutil  ]

Package: nast-ier (20101212+dfsg1-5)

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nast-ier

Trisquel Resources:

Download Source Package microbiomeutil:

Maintainer:

Original Maintainers:

  • Debian Med Packaging Team (Mail Archive)
  • Steffen Moeller
  • Andreas Tille

External Resources:

  • Homepage [microbiomeutil.sourceforge.net]

Similar packages:

NAST-based DNA alignment tool

The NAST-iEr alignment utility aligns a single raw nucleotide sequence against one or more NAST formatted sequences.

The alignment algorithm involves global dynamic programming profile alignment to fixed (NAST-formatted) multiply aligned template sequences without any end-gap penalty.

NAST-iEr is part of the microbiomeutil suite.

Other Packages Related to nast-ier

  • depends
  • recommends
  • suggests
  • dep: cdbfasta
    Constant DataBase indexing and retrieval tools for multi-FASTA files
  • dep: libc6 (>= 2.34)
    GNU C Library: Shared libraries
    also a virtual package provided by libc6-udeb
  • dep: microbiomeutil-data
    Reference 16S sequences and NAST-alignments used by microbiomeutil tools
  • rec: ncbi-blast+
    next generation suite of BLAST sequence search tools

Download nast-ier

Download for all available architectures
Architecture Package Size Installed Size Files
amd64 21.0 kB101 kB [list of files]
arm64 20.8 kB96 kB [list of files]
armhf 20.9 kB92 kB [list of files]
ppc64el 21.6 kB149 kB [list of files]