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Package: poa (2.0+20060928-8)

Partial Order Alignment for multiple sequence alignment

POA is Partial Order Alignment, a fast program for multiple sequence alignment (MSA) in bioinformatics. Its advantages are speed, scalability, sensitivity, and the superior ability to handle branching / indels in the alignment. Partial order alignment is an approach to MSA, which can be combined with existing methods such as progressive alignment. POA optimally aligns a pair of MSAs and which therefore can be applied directly to progressive alignment methods such as CLUSTAL. For large alignments, Progressive POA is 10-30 times faster than CLUSTALW.

Other Packages Related to poa

  • depends
  • recommends
  • suggests
  • dep: libc6 (>= 2.14) [amd64]
    GNU C Library: Shared libraries
    also a virtual package provided by libc6-udeb
    dep: libc6 (>= 2.17) [arm64, ppc64el]
    dep: libc6 (>= 2.7) [armhf]
  • sug: blast2
    Package not available
  • enh: t-coffee
    Multiple Sequence Alignment

Download poa

Download for all available architectures
Architecture Package Size Installed Size Files
amd64 52.2 kB140 kB [list of files]
arm64 49.0 kB131 kB [list of files]
armhf 47.8 kB111 kB [list of files]
ppc64el 59.9 kB184 kB [list of files]