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Package: sibelia (3.0.7+dfsg-3)

comparative genomics tool

Sibelia (Synteny Block ExpLoration tool) is a comparative genomics tool: It assists biologists in analysing the genomic variations that correlate with pathogens, or the genomic changes that help microorganisms adapt in different environments. Sibelia will also be helpful for the evolutionary and genome rearrangement studies for multiple strains of microorganisms.

Sibelia is useful in finding: 

 1) shared regions,
 2) regions that present in one group of genomes but not in others,
 3) rearrangements that transform one genome to other genomes.

Other Packages Related to sibelia

  • depends
  • recommends
  • suggests
  • dep: lagan
    highly parametrizable pairwise global genome sequence aligner
  • dep: libc6 (>= 2.14) [amd64]
    GNU C Library: Shared libraries
    also a virtual package provided by libc6-udeb
    dep: libc6 (>= 2.17) [arm64, ppc64el]
    dep: libc6 (>= 2.4) [armhf]
  • dep: libdivsufsort3 (>= 2.0.1)
    fast suffix array construction
  • dep: libgcc-s1 (>= 3.0) [not armhf]
    GCC support library
    dep: libgcc-s1 (>= 3.5) [armhf]
  • dep: libstdc++6 (>= 9)
    GNU Standard C++ Library v3
  • dep: python3
    interactive high-level object-oriented language (default python3 version)

Download sibelia

Download for all available architectures
Architecture Package Size Installed Size Files
amd64 312.5 kB1216 kB [list of files]
arm64 279.1 kB1124 kB [list of files]
armhf 290.7 kB955 kB [list of files]
ppc64el 301.7 kB1228 kB [list of files]