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Package: simka (1.5.3-5)

comparative metagenomics method dedicated to NGS datasets

Simka is a de novo comparative metagenomics tool. Simka represents each dataset as a k-mer spectrum and compute several classical ecological distances between them.

Other Packages Related to simka

  • depends
  • recommends
  • suggests
  • dep: libc6 (>= 2.34)
    GNU C Library: Shared libraries
    also a virtual package provided by libc6-udeb
  • dep: libgatbcore3 (>= 1.4.2) [amd64]
    dynamic library of the Genome Analysis Toolbox
    dep: libgatbcore3 (>= 1.4.2+dfsg) [not amd64]
  • dep: libgcc-s1 (>= 3.0) [amd64]
    GCC support library
    dep: libgcc-s1 (>= 4.2) [not amd64]
  • dep: libhdf5-103-1
    HDF5 C runtime files - serial version
  • dep: libstdc++6 (>= 11)
    GNU Standard C++ Library v3
  • dep: zlib1g (>= 1:1.2.6)
    compression library - runtime

Download simka

Download for all available architectures
Architecture Package Size Installed Size Files
amd64 473.8 kB2520 kB [list of files]
arm64 447.7 kB2320 kB [list of files]
ppc64el 475.3 kB2976 kB [list of files]