[ aramo ]
[ Source: vcfanno ]
Package: vcfanno-examples (0.3.3+ds-1)
Links for vcfanno-examples
Trisquel Resources:
Download Source Package vcfanno:
Maintainer:
Original Maintainers:
- Debian Med Packaging Team (Mail Archive)
- Andreas Tille
- Nilesh Patra
External Resources:
- Homepage [github.com]
Similar packages:
examples for vcfanno: annotate a VCF with other VCFs/BEDs/tabixed files
Vcfanno allows you to quickly annotate your VCF with any number of INFO fields from any number of VCFs or BED files. It uses a simple conf file to allow the user to specify the source annotation files and fields and how they will be added to the info of the query VCF.
* For VCF, values are pulled by name from the INFO field with special
cases of ID and FILTER to pull from those VCF columns.
* For BED, values are pulled from (1-based) column number.
* For BAM, depth (count), "mapq" and "seq" are currently supported.
This package contains a test data set as well as sample scripts running some test suite provided by Debian also as autopkgtest.
Download vcfanno-examples
| Architecture | Package Size | Installed Size | Files |
|---|---|---|---|
| all | 5,612.8 kB | 5707 kB | [list of files] |