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[ Източник: bwa  ]

Пакет: bwa (0.7.17-1ubuntu0.1)

Връзки за bwa

bwa

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Burrows-Wheeler Aligner

BWA is a software package for mapping low-divergent sequences against a large reference genome, such as the human genome. It consists of three algorithms: BWA-backtrack, BWA-SW and BWA-MEM. The first algorithm is designed for Illumina sequence reads up to 100bp, while the rest two for longer sequences ranged from 70bp to 1Mbp. BWA-MEM and BWA-SW share similar features such as long-read support and split alignment, but BWA-MEM, which is the latest, is generally recommended for high-quality queries as it is faster and more accurate. BWA-MEM also has better performance than BWA-backtrack for 70-100bp Illumina reads.

Други пакети, свързани с bwa

  • зависимости
  • препоръчани
  • предложени
  • dep: libc6 (>= 2.15)
    GNU C Library: Shared libraries
    също и виртуален пакет, предлаган от libc6-udeb
  • dep: zlib1g (>= 1:1.1.4)
    compression library - runtime
  • sug: samtools
    processing sequence alignments in SAM and BAM formats

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