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[ Quellcode: mindthegap ]
Paket: mindthegap (2.2.3-4)
Links für mindthegap
Trisquel-Ressourcen:
Quellcode-Paket mindthegap herunterladen:
Betreuer:
Original Maintainers:
- Debian Med Packaging Team (E-Mail-Archiv)
- Shayan Doust
Externe Ressourcen:
- Homepage [github.com]
Ähnliche Pakete:
performs detection and assembly of DNA insertion variants in NGS read datasets
Designed to call insertions of any size, whether they are novel or duplicated, homozygous or heterozygous in the donor genome. It takes as input a set of reads and a reference genome. It outputs two sets of FASTA sequences: one is the set of breakpoints of detection insertion sites, the other is the set of assembled insertions for each breakpoint. MindTheGap can also be used as a genome assembly finishing tool. It can fill the gaps between a set of input contigs without any a priori on their relative order and orientation. It outputs the results in gfa file.
Andere Pakete mit Bezug zu mindthegap
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- dep: libc6 (>= 2.34)
- GNU C Library: Shared libraries
auch ein virtuelles Paket, bereitgestellt durch libc6-udeb
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- dep: libgatbcore3 (>= 1.4.2+dfsg-7)
- dynamic library of the Genome Analysis Toolbox
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- dep: libgcc-s1 (>= 3.3.1)
- GCC support library
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- dep: libhdf5-103-1
- HDF5 C runtime files - serial version
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- dep: libstdc++6 (>= 11)
- GNU Standard C++ Library v3
mindthegap herunterladen
| Architektur | Paketgröße | Größe (installiert) | Dateien |
|---|---|---|---|
| amd64 | 218,7 kB | 740 kB | [Liste der Dateien] |
| arm64 | 198,0 kB | 656 kB | [Liste der Dateien] |
| ppc64el | 246,6 kB | 984 kB | [Liste der Dateien] |