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Paket: libssw0 (1.1-1)

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libssw0

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Quellcode-Paket libssw herunterladen:

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fast SIMD parallelized implementation of the Smith-Waterman algorithm

SSW is a fast implementation of the Smith-Waterman algorithm, which uses the Single-Instruction Multiple-Data (SIMD) instructions to parallelize the algorithm at the instruction level. SSW library provides an API that can be flexibly used by programs written in C, C++ and other languages. The library can do protein and genome alignment directly. Current version of this implementation is ~50 times faster than an ordinary Smith-Waterman. It can return the Smith-Waterman score, alignment location and traceback path (cigar) of the optimal alignment accurately; and return the sub-optimal alignment score and location heuristically.

Andere Pakete mit Bezug zu libssw0

  • hängt ab von
  • empfiehlt
  • schlägt vor
  • dep: libc6 (>= 2.14)
    GNU C Library: Shared libraries
    auch ein virtuelles Paket, bereitgestellt durch libc6-udeb
  • dep: libgcc1 (>= 1:3.0)
    GCC support library
  • dep: libstdc++6 (>= 5.2)
    GNU Standard C++ Library v3
  • dep: zlib1g
    compression library - runtime

libssw0 herunterladen

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amd64 15,8 kB44 kB [Liste der Dateien]