[ Quellcode: bio-eagle ]
Paket: bio-eagle (2.4.1-1build2)
Links für bio-eagle
Trisquel-Ressourcen:
Quellcode-Paket bio-eagle herunterladen:
Betreuer:
Original Maintainers:
- Debian Med Packaging Team (E-Mail-Archiv)
- Dylan Aïssi
Externe Ressourcen:
- Homepage [data.broadinstitute.org]
Ähnliche Pakete:
Haplotype phasing within a genotyped cohort or using a phased reference panel
Eagle estimates haplotype phase either within a genotyped cohort or using a phased reference panel. The basic idea of the Eagle1 algorithm is to harness identity-by-descent among distant relatives—which is pervasive at very large sample sizes but rare among smaller numbers of samples—to rapidly call phase using a fast scoring approach. In contrast, the Eagle2 algorithm analyzes a full probabilistic model similar to the diploid Li-Stephens model used by previous HMM-based methods.
Please note: The executable was renamed to bio-eagle because of a name clash. Please read more about this in /usr/share/doc/bio-eagle/README.Debian.
Andere Pakete mit Bezug zu bio-eagle
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- dep: libboost-iostreams1.71.0
- Boost.Iostreams Library
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- dep: libboost-program-options1.71.0
- program options library for C++
-
- dep: libc6 (>= 2.29)
- GNU C Library: Shared libraries
auch ein virtuelles Paket, bereitgestellt durch libc6-udeb
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- dep: libgcc-s1 (>= 3.0)
- GCC support library
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- dep: libgomp1 (>= 6)
- GCC OpenMP (GOMP) support library
-
- dep: libhts3 (>= 1.10)
- C library for high-throughput sequencing data formats
-
- dep: libopenblas0
- Optimized BLAS (linear algebra) library (meta)
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- dep: libstdc++6 (>= 5.2)
- GNU Standard C++ Library v3
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- rec: med-config (>= 2.1)
- Debian Med general config package
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- sug: bio-eagle-examples
- Examples for bio-eagle
bio-eagle herunterladen
| Architektur | Paketgröße | Größe (installiert) | Dateien |
|---|---|---|---|
| amd64 | 225,5 kB | 674 kB | [Liste der Dateien] |