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[ Source: sra-sdk  ]

Package: python3-ngs (3.0.3+dfsg-6ubuntu1)

Next Generation Sequencing language Bindings (Python3 bindings)

NGS is a new, domain-specific API for accessing reads, alignments and pileups produced from Next Generation Sequencing. The API itself is independent from any particular back-end implementation, and supports use of multiple back-ends simultaneously. It also provides a library for building new back-end "engines". The engine for accessing SRA data is contained within the sister repository ncbi-vdb.

The API is currently expressed in C++, Java and Python languages. The design makes it possible to maintain a high degree of similarity between the code in one language and code in another - especially between C++ and Java.

Python3 bindings.

Other Packages Related to python3-ngs

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  • dep: libncbi-ngs3 (<< 3.0.3+dfsg-6ubuntu1.1~)
    Next Generation Sequencing language Bindings (full runtime)
    dep: libncbi-ngs3 (>= 3.0.3+dfsg-6ubuntu1)
  • dep: python3
    interactive high-level object-oriented language (default python3 version)

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