[ Source: bwa ]
Package: bwa (0.7.17-6)
Links for bwa
Trisquel Resources:
Download Source Package bwa:
Maintainer:
Original Maintainers:
- Debian Med Packaging Team (Mail Archive)
- Charles Plessy
- Andreas Tille
- Carlos Borroto
- Ognyan Kulev
- Michael R. Crusoe
External Resources:
- Homepage [bio-bwa.sourceforge.net]
Similar packages:
Burrows-Wheeler Aligner
BWA is a software package for mapping low-divergent sequences against a large reference genome, such as the human genome. It consists of three algorithms: BWA-backtrack, BWA-SW and BWA-MEM. The first algorithm is designed for Illumina sequence reads up to 100bp, while the rest two for longer sequences ranged from 70bp to 1Mbp. BWA-MEM and BWA-SW share similar features such as long-read support and split alignment, but BWA-MEM, which is the latest, is generally recommended for high-quality queries as it is faster and more accurate. BWA-MEM also has better performance than BWA-backtrack for 70-100bp Illumina reads.
Other Packages Related to bwa
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- dep: libc6 (>= 2.33)
- GNU C Library: Shared libraries
also a virtual package provided by libc6-udeb
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- dep: zlib1g (>= 1:1.1.4)
- compression library - runtime
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- rec: perl
- Larry Wall's Practical Extraction and Report Language
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- sug: samtools
- processing sequence alignments in SAM, BAM and CRAM formats
Download bwa
| Architecture | Package Size | Installed Size | Files |
|---|---|---|---|
| amd64 | 190.6 kB | 455 kB | [list of files] |