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[ Source: htslib ]
Package: libhts3 (1.13+ds-2build1)
Links for libhts3
Trisquel Resources:
Download Source Package htslib:
Maintainer:
Original Maintainers:
- Debian Med Packaging Team (Mail Archive)
- Charles Plessy
- Andreas Tille
- Michael R. Crusoe
- Steffen Moeller
- Étienne Mollier
External Resources:
- Homepage [github.com]
Similar packages:
C library for high-throughput sequencing data formats
HTSlib is an implementation of a unified C library for accessing common file formats, such as SAM (Sequence Alignment/Map), CRAM and VCF (Variant Call Format), used for high-throughput sequencing data, and is the core library used by samtools and bcftools. HTSlib only depends on zlib. It is known to be compatible with gcc, g++ and clang.
HTSlib implements a generalized BAM (binary SAM) index, with file extension ‘csi’ (coordinate-sorted index). The HTSlib file reader first looks for the new index and then for the old if the new index is absent.
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- dep: libdeflate0 (>= 1.0)
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- dep: libhtscodecs2 (>= 1.1.1)
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- dep: liblzma5 (>= 5.1.1alpha+20120614)
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Download libhts3
| Architecture | Package Size | Installed Size | Files |
|---|---|---|---|
| amd64 | 380.6 kB | 943 kB | [list of files] |
| arm64 | 369.1 kB | 870 kB | [list of files] |
| armhf | 337.8 kB | 614 kB | [list of files] |
| ppc64el | 493.8 kB | 1499 kB | [list of files] |