Package: ggd-utils (1.0.0+ds-1)
Links for ggd-utils
Trisquel Resources:
Download Source Package ggd-utils:
Maintainer:
Original Maintainers:
- Debian Med Packaging Team (Mail Archive)
- Nilesh Patra
External Resources:
- Homepage [github.com]
Similar packages:
programs for use in ggd
Takes a genome file and (currently) a .vcf.gz or a .bed.gz and checks that:
* a .tbi is present * the VCF has ""##fileformat=VCF" as the first line * the VCF has a #CHROM header * the chromosome are in the order specified by the genome file (and present) * the positions are sorted * the positions are <= the chromosome lengths defined in the genome file.
As a result, any new genome going into GGD will have a .genome file that will dictate the sort order and presence or absence of the 'chr' prefix for chromosomes
Other Packages Related to ggd-utils
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- dep: libc6 (>= 2.34)
- GNU C Library: Shared libraries
also a virtual package provided by libc6-udeb
Download ggd-utils
Architecture | Package Size | Installed Size | Files |
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ppc64el | 1,519.1 kB | 4775 kB | [list of files] |