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Source Package: circlator (1.5.5-1)

Links for circlator

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The following binary packages are built from this source package:
circlator
circularize genome assemblies

Other Packages Related to circlator

  • build-depends
  • build-depends-indep
  • adep: debhelper (>= 10)
    helper programs for debian/rules
  • adep: dh-python
    Debian helper tools for packaging Python libraries and applications
  • adep: python3-all
    package depending on all supported Python 3 runtime versions
  • adep: python3-setuptools
    Python3 Distutils Enhancements
  • adep: python3-openpyxl
    Python 3 module to read/write OpenXML xlsx/xlsm files
  • adep: python3-jdcal
    Julian dates from proleptic Gregorian and Julian calendars
  • adep: fastaq (>= 3.12.1)
    FASTA and FASTQ file manipulation tools
  • adep: python3-pysam (>= 0.8.1)
    interface for the SAM/BAM sequence alignment and mapping format (Python 3)
  • adep: python3-pymummer (>= 0.9.0)
    Python 3 interface to MUMmer
  • adep: python3-nose
    test discovery and running for Python3 unittest
  • adep: spades
    genome assembler for single-cell and isolates data sets
  • adep: bwa (>= 0.7.12)
    Burrows-Wheeler Aligner
  • adep: prodigal
    Microbial (bacterial and archaeal) gene finding program
  • adep: canu
    single molecule sequence assembler for genomes

Download circlator

FileSize (in kB)MD5 checksum
circlator_1.5.5-1.dsc 2.1 kB 2dd32e866db37bd214163c9a16fa57bf
circlator_1.5.5.orig.tar.gz 5,587.2 kB 746cc828e634267d4e1e4ee30348803a
circlator_1.5.5-1.debian.tar.xz 3.1 kB 0a686af439ef87dbb0c2eacc12ca6ec5
Debian Package Source Repository (VCS: Git)
https://anonscm.debian.org/git/debian-med/circlator.git
Debian Package Source Repository (Browsable)
https://anonscm.debian.org/cgit/debian-med/circlator.git