Skip to content
Sections
>> Trisquel >> Packages >> etiona >> gnu-r >> r-bioc-genomicalignments
etiona  ] [  nabia  ] [  aramo  ]
[ Source: r-bioc-genomicalignments  ]

Package: r-bioc-genomicalignments (1.14.1-1)

BioConductor representation and manipulation of short genomic alignments

This BioConductor package provides efficient containers for storing and manipulating short genomic alignments (typically obtained by aligning short reads to a reference genome). This includes read counting, computing the coverage, junction detection, and working with the nucleotide content of the alignments.

Other Packages Related to r-bioc-genomicalignments

  • depends
  • recommends
  • suggests
  • sug: r-bioc-bsgenome
    BioConductor infrastructure for Biostrings-based genome data packages
  • sug: r-bioc-deseq2
    R package for RNA-Seq Differential Expression Analysis
  • sug: r-bioc-genomicfeatures
    GNU R tools for making and manipulating transcript centric annotations
  • sug: r-bioc-rtracklayer
    GNU R interface to genome browsers and their annotation tracks
  • sug: r-bioc-shortread
    GNU R classes and methods for high-throughput short-read sequencing data
  • sug: r-cran-runit
    GNU R package providing unit testing framework

Download r-bioc-genomicalignments

Download for all available architectures
Architecture Package Size Installed Size Files
amd64 1,657.4 kB2200 kB [list of files]
i386 1,652.6 kB2190 kB [list of files]