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Package: daligner (1.0+20180108-1)

local alignment discovery between long nucleotide sequencing reads

These tools permit one to find all significant local alignments between reads encoded in a Dazzler database. The assumption is that the reads are from a Pacific Biosciences RS II long read sequencer. That is, the reads are long and noisy, up to 15% on average.

Other Packages Related to daligner

  • depends
  • recommends
  • suggests
  • dep: libc6 (>= 2.14) [amd64]
    GNU C Library: Shared libraries
    also a virtual package provided by libc6-udeb
    dep: libc6 (>= 2.7) [i386]
  • sug: dascrubber
    alignment-based scrubbing pipeline for DNA sequencing reads
  • sug: dazzdb
    manage nucleotide sequencing read data

Download daligner

Download for all available architectures
Architecture Package Size Installed Size Files
amd64 171.8 kB1139 kB [list of files]
i386 167.7 kB1241 kB [list of files]