Package: maqview (0.2.5-8)
Links for maqview
Trisquel Resources:
Download Source Package maqview:
Maintainer:
Original Maintainers:
- Debian-Med Packaging Team (Mail Archive)
- Andreas Tille
- Charles Plessy
External Resources:
- Homepage [maq.sourceforge.net]
Similar packages:
graphical read alignment viewer for short gene sequences
Maqview is graphical read alignment viewer. It is specifically designed for the Maq alignment file and allows you to see the mismatches, base qualities and mapping qualities. Maqview is nothing fancy as Consed or GAP, but just a simple viewer for you to see what happens in a particular region.
In comparison to tgap-maq, the text-based read alignment viewer written by James Bonfield, Maqview is faster and takes up much less memory and disk space in indexing. This is possibly because tgap aims to be a general-purpose viewer but Maqview fully makes use of the fact that a Maq alignment file has already been sorted. Maqview is also efficient in viewing and provides a command-line tool to quickly retrieve any region in an Maq alignment file.
Other Packages Related to maqview
|
|
|
-
- dep: freeglut3
- OpenGL Utility Toolkit
-
- dep: libc6 (>= 2.15)
- GNU C Library: Shared libraries
also a virtual package provided by libc6-udeb
-
- dep: libgcc1 (>= 1:4.2) [i386]
- GCC support library
-
- dep: libgl1-mesa-glx
- transitional dummy package
- or libgl1
- Vendor neutral GL dispatch library -- legacy GL support
-
- dep: libglu1-mesa
- Mesa OpenGL utility library (GLU)
- or libglu1
- virtual package provided by libglu1-mesa
-
- dep: libstdc++6 (>= 5)
- GNU Standard C++ Library v3
Download maqview
| Architecture | Package Size | Installed Size | Files |
|---|---|---|---|
| amd64 | 107.5 kB | 606 kB | [list of files] |
| i386 | 118.0 kB | 633 kB | [list of files] |