[ Source: proteinortho ]
Package: proteinortho (5.16+dfsg-1)
Links for proteinortho
Trisquel Resources:
Download Source Package proteinortho:
- [proteinortho_5.16+dfsg-1.dsc]
- [proteinortho_5.16+dfsg.orig.tar.xz]
- [proteinortho_5.16+dfsg-1.debian.tar.xz]
Maintainer:
Original Maintainers:
- Debian Med Packaging Team (Mail Archive)
- Andreas Tille
External Resources:
- Homepage [www.bioinf.uni-leipzig.de]
Similar packages:
Detection of (Co-)orthologs in large-scale protein analysis
Proteinortho is a stand-alone tool that is geared towards large datasets and makes use of distributed computing techniques when run on multi-core hardware. It implements an extended version of the reciprocal best alignment heuristic. Proteinortho was applied to compute orthologous proteins in the complete set of all 717 eubacterial genomes available at NCBI at the beginning of 2009. Authors succeeded identifying thirty proteins present in 99% of all bacterial proteomes.
Other Packages Related to proteinortho
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- dep: libc6 (>= 2.14) [amd64]
- GNU C Library: Shared libraries
also a virtual package provided by libc6-udeb
- dep: libc6 (>= 2.4) [i386]
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- dep: libgcc1 (>= 1:3.0)
- GCC support library
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- dep: libstdc++6 (>= 5.2)
- GNU Standard C++ Library v3
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- dep: ncbi-blast+
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- dep: python
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Download proteinortho
| Architecture | Package Size | Installed Size | Files |
|---|---|---|---|
| amd64 | 139.8 kB | 280 kB | [list of files] |
| i386 | 141.8 kB | 279 kB | [list of files] |