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[ Source: htslib  ]

Package: tabix (1.7-2)

generic indexer for TAB-delimited genome position files

Tabix indexes files where some columns indicate sequence coordinates: name (usually a chromosome), start and stop. The input data file must be position sorted and compressed by bgzip (provided in this package), which has a gzip like interface. After indexing, tabix is able to quickly retrieve data lines by chromosomal coordinates. Fast data retrieval also works over network if an URI is given as a file name.

This version of tabix is built from the HTSlib source.

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Download tabix

Download for all available architectures
Architecture Package Size Installed Size Files
amd64 318.4 kB1692 kB [list of files]
i386 344.1 kB1925 kB [list of files]