Paketti: skewer (0.2.2-6)

Links for skewer

Trisquel-palvelut:

Imuroi lähdekoodipaketti skewer:

Ylläpitäjä:

Debian Med Packaging Team (Mail Archive)

Original Maintainers:

Debian Med Packaging Team (Mail Archive)
Steffen Moeller

External Resources:

Kotisivu [github.com]

Samankaltaisia paketteja:

post-processing of high-throughput DNA sequence reads

skewer implements the bit-masked k-difference matching algorithm dedicated to the task of adapter trimming and it is specially designed for processing next-generation sequencing (NGS) paired-end sequences.

Features

 * Detection and removal of adapter sequences
 * Insertion and deletion allowed in pattern matching
 * Targeted at Single End, Paired End (PE), and Long Mate Pair (LMP) reads
 * Demultiplexing of barcoded sequencing runs
 * Multi-threading support
 * Trimming based on phred quality scores
 * IUPAC characters for barcodes and adapters
 * Compressed input and output support

Muut pakettiin skewer liittyvät paketit

depends

recommends

suggests

dep: libc6 (>= 2.34)

GNU C Library: Shared libraries
myös näennäispaketti, jonka toteuttaa libc6-udeb
dep: libgcc-s1 (>= 3.3.1)

GCC support library
dep: libstdc++6 (>= 11)

GNU Standard C++ Library v3

Imuroi skewer

Imurointi kaikille saataville arkkitehtuureille
Arkkitehtuuri	Paketin koko	Koko asennettuna	Tiedostot
amd64	87.6 kt	197 kt	[tiedostoluettelo]

Sections