[ aramo ]
[ Source: tiddit ]
Paketti: tiddit (2.12.2+dfsg-1build1)
Links for tiddit
Trisquel-palvelut:
Imuroi lähdekoodipaketti tiddit:
- [tiddit_2.12.2+dfsg-1build1.dsc]
- [tiddit_2.12.2+dfsg.orig.tar.xz]
- [tiddit_2.12.2+dfsg-1build1.debian.tar.xz]
Ylläpitäjä:
Original Maintainers:
- Debian Med Packaging Team (Mail Archive)
- Andreas Tille
External Resources:
- Kotisivu [github.com]
Samankaltaisia paketteja:
structural variant calling
TIDDIT is a tool to used to identify chromosomal rearrangements using Mate Pair or Paired End sequencing data. TIDDIT identifies intra and inter- chromosomal translocations, deletions, tandem-duplications and inversions, using supplementary alignments as well as discordant pairs.
TIDDIT has two analysis modules. The sv mode, which is used to search for structural variants. And the cov mode that analyse the read depth of a bam file and generates a coverage report.
Muut pakettiin tiddit liittyvät paketit
|
|
|
-
- dep: libbamtools2.5.1 (>= 2.5.1+dfsg)
- dynamic library for manipulating BAM (genome alignment) files
-
- dep: libc6 (>= 2.34)
- GNU C Library: Shared libraries
myös näennäispaketti, jonka toteuttaa libc6-udeb
-
- dep: libgcc-s1 (>= 3.5)
- GCC support library
-
- dep: libstdc++6 (>= 11)
- GNU Standard C++ Library v3
-
- dep: python3
- interactive high-level object-oriented language (default python3 version)
- dep: python3 (<< 3.11)
- dep: python3 (>= 3.10~)
Imuroi tiddit
| Arkkitehtuuri | Paketin koko | Koko asennettuna | Tiedostot |
|---|---|---|---|
| armhf | 241.3 kt | 573 kt | [tiedostoluettelo] |