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[ Source: cyvcf2 ]
Paketti: python3-cyvcf2 (0.30.14-1build1)
Links for python3-cyvcf2
Trisquel-palvelut:
Imuroi lähdekoodipaketti cyvcf2:
Ylläpitäjä:
Original Maintainers:
- Debian Med Packaging Team (Mail Archive)
- Steffen Moeller
- Liubov Chuprikova
- Nilesh Patra
External Resources:
- Kotisivu [github.com]
Samankaltaisia paketteja:
VCF parser based on htslib (Python 3)
This modules allows fast parsing of VCF and BCF including region-queries with Python. This is essential for efficient analyses of nucleotide variation with Python on high-throughput sequencing data.
cyvcf2 is a cython wrapper around htslib. Attributes like variant.gt_ref_depths return a numpy array directly so they are immediately ready for downstream use.
This package installs the library for Python 3.
Muut pakettiin python3-cyvcf2 liittyvät paketit
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- dep: libc6 (>= 2.14) [amd64]
- GNU C Library: Shared libraries
myös näennäispaketti, jonka toteuttaa libc6-udeb
- dep: libc6 (>= 2.17) [arm64, ppc64el]
- dep: libc6 (>= 2.7) [armhf]
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- dep: libhts3 (>= 1.10)
- C library for high-throughput sequencing data formats
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- dep: python3
- interactive high-level object-oriented language (default python3 version)
- dep: python3 (<< 3.11)
- dep: python3 (>= 3.10~)
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- dep: python3-click
- Wrapper around optparse for command line utilities - Python 3.x
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- dep: python3-coloredlogs
- colored terminal output for Python 3's logging module
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- dep: python3-numpy (>= 1:1.20.0)
- Fast array facility to the Python 3 language
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- dep: python3-numpy-abi9
- näennäispaketti, jonka toteuttaa python3-numpy
Imuroi python3-cyvcf2
| Arkkitehtuuri | Paketin koko | Koko asennettuna | Tiedostot |
|---|---|---|---|
| amd64 | 817.0 kt | 4733 kt | [tiedostoluettelo] |
| arm64 | 806.8 kt | 4671 kt | [tiedostoluettelo] |
| armhf | 794.9 kt | 4455 kt | [tiedostoluettelo] |
| ppc64el | 874.8 kt | 5036 kt | [tiedostoluettelo] |