[ Source: bio-tradis ]
Paketti: bio-tradis (1.3.3+dfsg-3)
Links for bio-tradis
Trisquel-palvelut:
Imuroi lähdekoodipaketti bio-tradis:
- [bio-tradis_1.3.3+dfsg-3.dsc]
- [bio-tradis_1.3.3+dfsg.orig.tar.xz]
- [bio-tradis_1.3.3+dfsg-3.debian.tar.xz]
Ylläpitäjä:
Original Maintainers:
- Debian Med Packaging Team (Mail Archive)
- Andreas Tille
External Resources:
- Kotisivu [github.com]
Samankaltaisia paketteja:
analyse the output from TraDIS analyses of genomic sequences
Bio-Tradis contains a set of tools to analyse the output from TraDIS analyses.
The Bio-Tradis analysis pipeline is implemented as an extensible Perl library which can either be used as is, or as a basis for the development of more advanced analysis tools.
Please note: You need to manually install BioConductor Edger which can not be distributed by Debian in recent version since it is using non-distributable code locfit.
Muut pakettiin bio-tradis liittyvät paketit
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- dep: perl
- Larry Wall's Practical Extraction and Report Language
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- dep: r-base-core
- GNU R core of statistical computation and graphics system
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- dep: r-cran-getopt
- GNU R package providing command-line parsing functionality
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- dep: r-cran-mass
- GNU R package of Venables and Ripley's MASS
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- dep: samtools
- processing sequence alignments in SAM and BAM formats
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- dep: smalt
- Sequence Mapping and Alignment Tool
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- dep: tabix
- generic indexer for TAB-delimited genome position files
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- sug: artemis
- genome browser and annotation tool
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- sug: r-bioc-edger
- Paketti ei saatavilla
Imuroi bio-tradis
| Arkkitehtuuri | Paketin koko | Koko asennettuna | Tiedostot |
|---|---|---|---|
| all | 36.9 kt | 165 kt | [tiedostoluettelo] |