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Paketti: r-cran-adegenet (2.1.1-1)

GNU R exploratory analysis of genetic and genomic data

Toolset for the exploration of genetic and genomic data. Adegenet provides formal (S4) classes for storing and handling various genetic data, including genetic markers with varying ploidy and hierarchical population structure ('genind' class), alleles counts by populations ('genpop'), and genome-wide SNP data ('genlight'). It also implements original multivariate methods (DAPC, sPCA), graphics, statistical tests, simulation tools, distance and similarity measures, and several spatial methods. A range of both empirical and simulated datasets is also provided to illustrate various methods.

Muut pakettiin r-cran-adegenet liittyvät paketit

  • depends
  • recommends
  • suggests
  • dep: libc6 (>= 2.4)
    GNU C Library: Shared libraries
    myös näennäispaketti, jonka toteuttaa libc6-udeb
  • dep: r-api-3.4
    näennäispaketti, jonka toteuttaa r-base-core
  • dep: r-base-core (>= 3.4.3-1)
    GNU R core of statistical computation and graphics system
  • dep: r-cran-ade4
    GNU R analysis of ecological data
  • dep: r-cran-ape
    GNU R package for Analyses of Phylogenetics and Evolution
  • dep: r-cran-boot
    GNU R package for bootstrapping functions from Davison and Hinkley
  • dep: r-cran-dplyr (>= 0.4.1)
    GNU R grammar of data manipulation
  • dep: r-cran-ggplot2
    implementation of the Grammar of Graphics
  • dep: r-cran-igraph
    GNU R network analysis and visualization
  • dep: r-cran-mass
    GNU R package of Venables and Ripley's MASS
  • dep: r-cran-reshape2
    Flexibly reshape data: a reboot of the reshape package
  • dep: r-cran-seqinr
    GNU R biological sequences retrieval and analysis
  • dep: r-cran-shiny
    GNU R web application framework
  • dep: r-cran-spdep
    GNU R spatial dependence: weighting schemes, statistics and models
  • dep: r-cran-vegan
    Community Ecology Package for R

Imuroi r-cran-adegenet

Imurointi kaikille saataville arkkitehtuureille
Arkkitehtuuri Paketin koko Koko asennettuna Tiedostot
amd64 2,201.7 kt4242 kt [tiedostoluettelo]
i386 2,212.5 kt4247 kt [tiedostoluettelo]