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Paketti: r-cran-bio3d (2.3-4-1)

GNU R package for biological structure analysis

The bio3d package contains utilities to process, organize and explore protein structure, sequence and dynamics data. Features include the ability to read and write structure, sequence and dynamic trajectory data, perform atom summaries, atom selection, re-orientation, superposition, rigid core identification, clustering, torsion analysis, distance matrix analysis, structure and sequence conservation analysis, and principal component analysis (PCA). In addition, various utility functions are provided to enable the statistical and graphical power of the R environment to work with biological sequence and structural data.

Muut pakettiin r-cran-bio3d liittyvät paketit

  • depends
  • recommends
  • suggests
  • dep: libc6 (>= 2.14) [amd64]
    GNU C Library: Shared libraries
    myös näennäispaketti, jonka toteuttaa libc6-udeb
    dep: libc6 (>= 2.4) [i386]
  • dep: libgcc1 (>= 1:3.0)
    GCC support library
  • dep: libstdc++6 (>= 5.2)
    GNU Standard C++ Library v3
  • dep: r-api-3.4
    näennäispaketti, jonka toteuttaa r-base-core
  • dep: r-base-core (>= 3.4.3-1build1)
    GNU R core of statistical computation and graphics system
  • dep: r-cran-rcpp
    GNU R package for Seamless R and C++ Integration
  • dep: zlib1g (>= 1:1.1.4)
    compression library - runtime
  • rec: muscle
    Multiple alignment program of protein sequences
  • sug: mafft
    Multiple alignment program for amino acid or nucleotide sequences
  • sug: r-cran-httr
    GNU R tools for working with URLs and HTTP
  • sug: r-cran-igraph
    GNU R network analysis and visualization
  • sug: r-cran-knitr
    GNU R package for dynamic report generation using Literate Programming
  • sug: r-cran-lattice
    GNU R package for 'Trellis' graphics
  • sug: r-cran-ncdf4
    GNU R interface to Unidata netCDF format data files
  • sug: r-cran-rcurl
    GNU R General network (HTTP/FTP/...) client interface
  • sug: r-cran-testthat (>= 0.9.1)
    GNU R testsuite
  • sug: r-cran-xml
    GNU R package for XML parsing and generation

Imuroi r-cran-bio3d

Imurointi kaikille saataville arkkitehtuureille
Arkkitehtuuri Paketin koko Koko asennettuna Tiedostot
amd64 2,115.7 kt3117 kt [tiedostoluettelo]
i386 2,121.4 kt3127 kt [tiedostoluettelo]