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Paketti: dascrubber (0~20180108-1)

alignment-based scrubbing pipeline for DNA sequencing reads

The Dazzler Scrubbing Suite produces a set of edited reads that are guaranteed to

 * be continuous stretches of the underlying genome (i.e. no unremoved
   adapters and not chimers)
 * have no very low quality stretches (i.e. the error rate never exceeds some
   reasonable maximum, 20% or so in the case of Pacbio data).
Its secondary goal is to do so with the minimum removal of data and splitting of reads.

Muut pakettiin dascrubber liittyvät paketit

  • depends
  • recommends
  • suggests
  • dep: libc6 (>= 2.7)
    GNU C Library: Shared libraries
    myös näennäispaketti, jonka toteuttaa libc6-udeb
  • sug: daligner
    local alignment discovery between long nucleotide sequencing reads
  • sug: dazzdb
    manage nucleotide sequencing read data

Imuroi dascrubber

Imurointi kaikille saataville arkkitehtuureille
Arkkitehtuuri Paketin koko Koko asennettuna Tiedostot
amd64 147.1 kt982 kt [tiedostoluettelo]
i386 142.0 kt1066 kt [tiedostoluettelo]