Skip to content
Sections
>> Trisquel >> Paketit >> etiona >> science >> perm
etiona  ] [  nabia  ] [  aramo  ]
[ Source: perm  ]

Paketti: perm (0.4.0-3)

efficient mapping of short reads with periodic spaced seeds

PerM is a software package which was designed to perform highly efficient genome scale alignments for hundreds of millions of short reads produced by the ABI SOLiD and Illumina sequencing platforms. Today PerM is capable of providing full sensitivity for alignments within 4 mismatches for 50bp SOLID reads and 9 mismatches for 100bp Illumina reads.

Muut pakettiin perm liittyvät paketit

  • depends
  • recommends
  • suggests
  • dep: libc6 (>= 2.14) [amd64]
    GNU C Library: Shared libraries
    myös näennäispaketti, jonka toteuttaa libc6-udeb
    dep: libc6 (>= 2.4) [i386]
  • dep: libgcc1 (>= 1:3.4)
    GCC support library
  • dep: libgomp1 (>= 4.9)
    GCC OpenMP (GOMP) support library
  • dep: libstdc++6 (>= 5.2)
    GNU Standard C++ Library v3

Imuroi perm

Imurointi kaikille saataville arkkitehtuureille
Arkkitehtuuri Paketin koko Koko asennettuna Tiedostot
amd64 119.8 kt325 kt [tiedostoluettelo]
i386 137.6 kt380 kt [tiedostoluettelo]