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[ Source: sprai ]
Paketti: sprai (0.9.9.23+dfsg-1)
Links for sprai
Trisquel-palvelut:
Imuroi lähdekoodipaketti sprai:
Ylläpitäjä:
Original Maintainers:
- Debian Med Packaging Team (Mail Archive)
- Afif Elghraoui
External Resources:
- Kotisivu [zombie.cb.k.u-tokyo.ac.jp]
Samankaltaisia paketteja:
single-pass sequencing read accuracy improver
Sprai is a tool to correct sequencing errors in single-pass reads for de novo assembly. It is originally designed for correcting sequencing errors in single-molecule DNA sequencing reads, especially in Continuous Long Reads (CLRs) generated by PacBio RS sequencers. The goal of Sprai is not maximizing the accuracy of error-corrected reads. Instead, Sprai aims at maximizing the continuity (i.e., N50 contig length) of assembled contigs after error correction.
Muut pakettiin sprai liittyvät paketit
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- dep: libc6 (>= 2.7)
- GNU C Library: Shared libraries
myös näennäispaketti, jonka toteuttaa libc6-udeb
-
- dep: ncbi-blast+ (>= 2.2.27)
- next generation suite of BLAST sequence search tools
-
- dep: perl
- Larry Wall's Practical Extraction and Report Language
-
- dep: time
- GNU time program for measuring CPU resource usage
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- sug: make
- utility for directing compilation
myös näennäispaketti, jonka toteuttaa make-guile
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- sug: pbalign
- map Pacific Biosciences reads to reference DNA sequences
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- sug: pbgenomicconsensus
- Pacific Biosciences variant and consensus caller
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- sug: pbh5tools
- tools for manipulating Pacific Biosciences HDF5 files
Imuroi sprai
| Arkkitehtuuri | Paketin koko | Koko asennettuna | Tiedostot |
|---|---|---|---|
| amd64 | 1,479.6 kt | 1701 kt | [tiedostoluettelo] |
| i386 | 1,478.7 kt | 1699 kt | [tiedostoluettelo] |