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Paketti: ssake (4.0-1)

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ssake

Trisquel-palvelut:

Imuroi lähdekoodipaketti ssake:

Ylläpitäjä:

Original Maintainers:

  • Debian Med Packaging Team (Mail Archive)
  • Andreas Tille
  • Charles Plessy

External Resources:

Samankaltaisia paketteja:

genomics application for assembling millions of very short DNA sequences

The Short Sequence Assembly by K-mer search and 3′ read Extension (SSAKE) is a genomics application for aggressively assembling millions of short nucleotide sequences by progressively searching for perfect 3′-most k-mers using a DNA prefix tree. SSAKE is designed to help leverage the information from short sequences reads by stringently clustering them into contigs that can be used to characterize novel sequencing targets.

Muut pakettiin ssake liittyvät paketit

  • depends
  • recommends
  • suggests
  • dep: libperl4-corelibs-perl
    libraries historically supplied with Perl 4
  • dep: perl
    Larry Wall's Practical Extraction and Report Language
  • dep: python
    interactive high-level object-oriented language (default version)
  • sug: ssake-examples
    example data for SSAKE, a genomic assembler of short reads

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