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Paketti: sspace (2.1.1+dfsg-3)

Links for sspace

sspace

Trisquel-palvelut:

Imuroi lähdekoodipaketti sspace:

Ylläpitäjä:

Original Maintainers:

  • Debian Med Packaging Team (Mail Archive)
  • Andreas Tille
  • Sascha Steinbiss

External Resources:

Samankaltaisia paketteja:

scaffolding pre-assembled contigs after extension

SSAKE-based Scaffolding of Pre-Assembled Contigs after Extension (SSPACE) is a script able to extend and scaffold pre-assembled contigs using one or more mate pairs or paired-end libraries, or even a combination.

SSPACE is built based on SSAKE. Code of SSAKE is changed to be able to extend and scaffold pre-assembled contigs for multiple paired reads libraries.

This is the free 'basic' version of SSPACE. The non-free 'standard' version is available directly from Baseclear.

Muut pakettiin sspace liittyvät paketit

  • depends
  • recommends
  • suggests
  • dep: bowtie
    Ultrafast memory-efficient short read aligner
  • dep: perl
    Larry Wall's Practical Extraction and Report Language
  • dep: python
    interactive high-level object-oriented language (default version)

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