[  etiona  ] [  nabia  ] [  aramo  ]

[ Source: circlator  ]

Links for circlator

Trisquel-palvelut:

• Install using apturl
• Entry at directory.fsf.org
• Vikailmoitukset
• Changelog
• Tekijänoikeustiedosto

Imuroi lähdekoodipaketti circlator:

• [circlator_1.5.6-1.dsc]
• [circlator_1.5.6.orig.tar.gz]
• [circlator_1.5.6-1.debian.tar.xz]

Ylläpitäjä:

• Debian Med Packaging Team (Mail Archive)

Original Maintainers:

• Debian Med Packaging Team (Mail Archive)
• Andreas Tille

External Resources:

• Kotisivu [sanger-pathogens.github.io]

Samankaltaisia paketteja:

• unicycler
• plasmidseeker
• unicycler-data
• busco
• metaphlan2
• plasmidid
• metaphlan2-data
• soapdenovo2
• parsnp
• soapdenovo
• shasta

Muut pakettiin circlator liittyvät paketit

depends

recommends

suggests

• dep: bwa (>= 0.7.12)

  Burrows-Wheeler Aligner

• dep: fastaq (>= 3.12.1)

  FASTA and FASTQ file manipulation tools

• dep: mummer

  Efficient sequence alignment of full genomes

• dep: prodigal

  Microbial (bacterial and archaeal) gene finding program

• dep: python3

  interactive high-level object-oriented language (default python3 version)

• dep: python3-openpyxl

  Python 3 module to read/write OpenXML xlsx/xlsm files

• dep: python3-pymummer

  Python 3 interface to MUMmer

• dep: python3-pysam

  interface for the SAM/BAM sequence alignment and mapping format (Python 3)

• dep: samtools

  processing sequence alignments in SAM, BAM and CRAM formats

• dep: spades

  genome assembler for single-cell and isolates data sets

• sug: canu

  single molecule sequence assembler for genomes

Imuroi circlator

Imurointi kaikille saataville arkkitehtuureille

Arkkitehtuuri	Paketin koko	Koko asennettuna	Tiedostot
amd64	4,226.1 kt	10302 kt	[tiedostoluettelo]