[ Paquet source : bowtie2 ]
Paquet : bowtie2 (2.4.4-1)
Liens pour bowtie2
Ressources Trisquel :
Télécharger le paquet source bowtie2 :
Responsable :
Original Maintainers:
- Debian Med Packaging Team (Archive du courrier électronique)
- Alexandre Mestiashvili
- Andreas Tille
Ressources externes :
- Page d'accueil [bowtie-bio.sourceforge.net]
Paquets similaires :
ultrafast memory-efficient short read aligner
is an ultrafast and memory-efficient tool for aligning sequencing reads to long reference sequences. It is particularly good at aligning reads of about 50 up to 100s or 1,000s of characters, and particularly good at aligning to relatively long (e.g. mammalian) genomes.
Bowtie 2 indexes the genome with an FM Index to keep its memory footprint small: for the human genome, its memory footprint is typically around 3.2 GB. Bowtie 2 supports gapped, local, and paired-end alignment modes
Autres paquets associés à bowtie2
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- dep: libc6 (>= 2.34)
- GNU C Library: Shared libraries
un paquet virtuel est également fourni par libc6-udeb
-
- dep: libgcc-s1 (>= 3.3.1) [non amd64]
- GCC support library
- dep: libgcc-s1 (>= 3.4) [amd64]
-
- dep: libstdc++6 (>= 9)
- GNU Standard C++ Library v3
-
- dep: perl
- Larry Wall's Practical Extraction and Report Language
-
- dep: python3
- interactive high-level object-oriented language (default python3 version)
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- dep: zlib1g (>= 1:1.2.6)
- compression library - runtime
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- sug: bowtie2-examples
- Examples for bowtie2
Télécharger bowtie2
| Architecture | Taille du paquet | Espace occupé une fois installé | Fichiers |
|---|---|---|---|
| amd64 | 1 141,3 ko | 3647 ko | [liste des fichiers] |
| arm64 | 1 178,2 ko | 3143 ko | [liste des fichiers] |
| ppc64el | 1 324,7 ko | 3931 ko | [liste des fichiers] |