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Paquet : deepnano (0.0+git20170813.e8a621e-3.1build1)

alternative basecaller for MinION reads of genomic sequences

DeepNano is alternative basecaller for Oxford Nanopore MinION reads based on deep recurrent neural networks.

Currently it works with SQK-MAP-006 and SQK-MAP-005 chemistry and as a postprocessor for Metrichor.

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  • dep: deepnano-data
    alternative basecaller for MinION reads of genomic sequences (data)
  • dep: libc6 (>= 2.29)
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    un paquet virtuel est également fourni par libc6-udeb
  • dep: libgcc-s1 (>= 3.0) [non armhf]
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    dep: libgcc-s1 (>= 3.5) [armhf]
  • dep: libstdc++6 (>= 5.2)
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  • dep: python3
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  • dep: python3-dateutil
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  • dep: python3-h5py
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  • dep: python3-numpy
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  • dep: python3-theano
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  • rec: python3-watchdog
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Architecture Taille du paquet Espace occupé une fois installé Fichiers
amd64 20,4 ko98 ko [liste des fichiers]
arm64 19,9 ko90 ko [liste des fichiers]
armhf 19,2 ko80 ko [liste des fichiers]
ppc64el 22,7 ko194 ko [liste des fichiers]