Paquet : vcfanno-examples (0.3.3+ds-1)

Liens pour vcfanno-examples

Ressources Trisquel :

Télécharger le paquet source vcfanno :

Responsable :

Debian Med Packaging Team (Archive du courrier électronique)

Original Maintainers:

Debian Med Packaging Team (Archive du courrier électronique)
Andreas Tille
Nilesh Patra

Ressources externes :

Page d'accueil [github.com]

Paquets similaires :

examples for vcfanno: annotate a VCF with other VCFs/BEDs/tabixed files

Vcfanno allows you to quickly annotate your VCF with any number of INFO fields from any number of VCFs or BED files. It uses a simple conf file to allow the user to specify the source annotation files and fields and how they will be added to the info of the query VCF.

  * For VCF, values are pulled by name from the INFO field with special
    cases of ID and FILTER to pull from those VCF columns.
  * For BED, values are pulled from (1-based) column number.
  * For BAM, depth (count), "mapq" and "seq" are currently supported.

This package contains a test data set as well as sample scripts running some test suite provided by Debian also as autopkgtest.

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