Paquet : mafft (7.490-1)
Liens pour mafft
Ressources Trisquel :
Télécharger le paquet source mafft :
Responsable :
Original Maintainers:
- Debian Med Packaging Team (Archive du courrier électronique)
- Charles Plessy
- Andreas Tille
- Nilesh Patra
Ressources externes :
- Page d'accueil [mafft.cbrc.jp]
Paquets similaires :
Multiple alignment program for amino acid or nucleotide sequences
MAFFT is a multiple sequence alignment program which offers three accuracy-oriented methods:
* L-INS-i (probably most accurate; recommended for <200 sequences; iterative refinement method incorporating local pairwise alignment information), * G-INS-i (suitable for sequences of similar lengths; recommended for <200 sequences; iterative refinement method incorporating global pairwise alignment information), * E-INS-i (suitable for sequences containing large unalignable regions; recommended for <200 sequences),and five speed-oriented methods:
* FFT-NS-i (iterative refinement method; two cycles only), * FFT-NS-i (iterative refinement method; max. 1000 iterations), * FFT-NS-2 (fast; progressive method), * FFT-NS-1 (very fast; recommended for >2000 sequences; progressive method with a rough guide tree), * NW-NS-PartTree-1 (recommended for ∼50,000 sequences; progressive method with the PartTree algorithm).
Autres paquets associés à mafft
|
|
|
-
- dep: libc6 (>= 2.34)
- GNU C Library: Shared libraries
un paquet virtuel est également fourni par libc6-udeb
-
- dep: perl
- Larry Wall's Practical Extraction and Report Language
-
- rec: blast2
- Paquet indisponible
-
- rec: libwww-perl
- simple and consistent interface to the world-wide web
-
- rec: lynx
- classic non-graphical (text-mode) web browser
-
- rec: ruby
- Interpreter of object-oriented scripting language Ruby (default version)
-
- enh: t-coffee
- Multiple Sequence Alignment
Télécharger mafft
Architecture | Taille du paquet | Espace occupé une fois installé | Fichiers |
---|---|---|---|
ppc64el | 951,7 ko | 6090 ko | [liste des fichiers] |