Paquet : yanosim (0.1-4)
Liens pour yanosim
Ressources Trisquel :
Télécharger le paquet source yanosim :
Responsable :
Original Maintainers:
- Debian Med Packaging Team (Archive du courrier électronique)
- Nilesh Patra
Ressources externes :
- Page d'accueil [github.com]
Paquets similaires :
read simulator nanopore DRS datasets
Yanosim has three options:
1. yanosim model:
Creates an model of mismatches, insertions and deletions based on an alignment of nanopore DRS reads to a reference. Reads should be aligned to a transcriptome i.e. without spliced alignment, using minimap2. They should have the cs tag.2. yanosim quantify:
Quantify the number of reads mapping to each transcript in a reference, so that the right number of reads can be simulated.3. yanosim simulate:
Given a model created using yanosim model, and per-transcript read counts created using yanosim simulate, simulate error-prone long-reads from the given fasta file.
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Télécharger yanosim
Architecture | Taille du paquet | Espace occupé une fois installé | Fichiers |
---|---|---|---|
ppc64el | 9,5 ko | 45 ko | [liste des fichiers] |