Paquet : pbhoney (15.8.24+dfsg-2)
Liens pour pbhoney
Ressources Trisquel :
Télécharger le paquet source pbsuite :
- [pbsuite_15.8.24+dfsg-2.dsc]
- [pbsuite_15.8.24+dfsg.orig.tar.xz]
- [pbsuite_15.8.24+dfsg-2.debian.tar.xz]
Responsable :
Original Maintainers:
- Debian Med Packaging Team (Archive du courrier électronique)
- Afif Elghraoui
Ressources externes :
- Page d'accueil [sourceforge.net]
Paquets similaires :
genomic structural variation discovery
PBHoney is an implementation of two variant-identification approaches designed to exploit the high mappability of long reads (i.e., greater than 10,000 bp). PBHoney considers both intra-read discordance and soft-clipped tails of long reads to identify structural variants.
PBHoney is part of the PBSuite.
Autres paquets associés à pbhoney
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- dep: blasr (>= 5.3)
- mapping single-molecule sequencing reads
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- dep: python
- interactive high-level object-oriented language (default version)
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- dep: python-h5py (>= 2.0.1)
- general-purpose Python interface to hdf5 (Python 2)
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- dep: python-intervaltree-bio
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- dep: python-networkx
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- dep: python-numpy
- Numerical Python adds a fast array facility to the Python language
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- dep: python-pbbanana (= 15.8.24+dfsg-2)
- additional utilities for the pbsuite
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- dep: python-pbsuite-utils (= 15.8.24+dfsg-2)
- software for Pacific Biosciences sequencing data -- Python utilities
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- dep: python-pysam (>= 0.8.0)
- interface for the SAM/BAM sequence alignment and mapping format (Python 2)
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- dep: samtools
- processing sequence alignments in SAM and BAM formats
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- rec: pbdagcon
- sequence consensus using directed acyclic graphs
Télécharger pbhoney
Architecture | Taille du paquet | Espace occupé une fois installé | Fichiers |
---|---|---|---|
all | 1 276,3 ko | 2353 ko | [liste des fichiers] |