Paquet : bppsuite (2.4.0-1)
Liens pour bppsuite
Ressources Trisquel :
Télécharger le paquet source bppsuite :
Responsable :
Original Maintainers:
- Debian Med Packaging Team (Archive du courrier électronique)
- Julien Dutheil
- Andreas Tille
Ressources externes :
- Page d'accueil [biopp.univ-montp2.fr]
Paquets similaires :
Bio++ program suite
The Bio++ Program Suite is a package of programs using the Bio++ libraries and dedicated to Phylogenetics and Molecular Evolution. All programs are independent, but can be combined to perform rather complex analyses. These programs use the interface helper tools of the libraries, and hence share the same syntax. They also have several options in common, which may also be shared by third-party software.
The following programs are included:
- BppML for maximum likelihood analysis, - BppSeqGen for sequences simulation, - BppAncestor for ancestral states reconstruction, - BppDist for distance methods, - BppPars for parsimony analysis, - BppSeqMan for file conversion and sequence manipulation, - BppConsense for building consensus tree and computing bootstrap values, - BppReRoot for tree rerooting. - BppTreeDraw for tree drawing. - BppAlnScore for comparing alignments and computing alignment scores. - BppMixedLikelihoods for computing site per site likelihoods of components of mixture models. - BppPopGen for population genetics analyses.
Autres paquets associés à bppsuite
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- dep: libbpp-core4 [i386]
- Bio++ Core library
- dep: libbpp-core4 (>= 2.4.0) [amd64]
-
- dep: libbpp-phyl12 [i386]
- Bio++ Phylogenetic library
- dep: libbpp-phyl12 (>= 2.4.0) [amd64]
-
- dep: libbpp-popgen8 [i386]
- Bio++ Population Genetics library
- dep: libbpp-popgen8 (>= 2.4.0) [amd64]
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- dep: libbpp-seq12 [i386]
- Bio++ Sequence library
- dep: libbpp-seq12 (>= 2.4.0) [amd64]
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- dep: libc6 (>= 2.14) [amd64]
- GNU C Library: Shared libraries
un paquet virtuel est également fourni par libc6-udeb
- dep: libc6 (>= 2.4) [i386]
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- dep: libgcc1 (>= 1:3.0)
- GCC support library
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- dep: libstdc++6 (>= 5.2)
- GNU Standard C++ Library v3
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- sug: bppsuite-examples
- Examples for Bio++ program suite
Télécharger bppsuite
Architecture | Taille du paquet | Espace occupé une fois installé | Fichiers |
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amd64 | 335,1 ko | 1700 ko | [liste des fichiers] |
i386 | 339,3 ko | 1572 ko | [liste des fichiers] |