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Paquet : clustalw (2.1+lgpl-5)

global multiple nucleotide or peptide sequence alignment

This program performs an alignment of multiple nucleotide or amino acid sequences. It recognizes the format of input sequences and whether the sequences are nucleic acid (DNA/RNA) or amino acid (proteins). The output format may be selected from in various formats for multiple alignments such as Phylip or FASTA. Clustal W is very well accepted.

The output of Clustal W can be edited manually but preferably with an alignment editor like SeaView or within its companion Clustal X. When building a model from your alignment, this can be applied for improved database searches. The Debian package hmmer creates such in form of an HMM.

Autres paquets associés à clustalw

  • dépendances
  • recommandations
  • suggestions
  • dep: libc6 (>= 2.14) [amd64]
    GNU C Library: Shared libraries
    un paquet virtuel est également fourni par libc6-udeb
    dep: libc6 (>= 2.4) [i386]
  • dep: libgcc1 (>= 1:3.0)
    GCC support library
  • dep: libstdc++6 (>= 5.2)
    GNU Standard C++ Library v3
  • sug: clustalx
    Paquet indisponible
  • sug: seaview
    Paquet indisponible
  • enh: bioperl-run
    BioPerl wrappers: scripts
  • enh: emboss
    European molecular biology open software suite
  • enh: t-coffee
    Multiple Sequence Alignment

Télécharger clustalw

Télécharger pour toutes les architectures proposées
Architecture Taille du paquet Espace occupé une fois installé Fichiers
amd64 274,0 ko790 ko [liste des fichiers]
i386 284,5 ko825 ko [liste des fichiers]