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Paquet : ampliconnoise (1.29-7)

removal of noise from 454 sequenced PCR amplicons

AmpliconNoise is a package of applications to clean up high-throughput sequence data. It consists of three main parts:

Pyronoise - does flowgram-based clustering to spot misreads SeqNoise - removes PCR point mutations Perseus - removes PCR chimeras without the need for a set of reference sequences

Previously there was a standalone "Pyronoise" by the same authors and this package includes an updated version. There is also a "Denoiser" in Qiime which is related but distinct.

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    dep: libc6 (>= 2.4) [i386]
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  • dep: libopenmpi2
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  • dep: mafft
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  • rec: openmpi-bin
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Architecture Taille du paquet Espace occupé une fois installé Fichiers
amd64 468,1 ko1387 ko [liste des fichiers]
i386 458,1 ko1346 ko [liste des fichiers]