[ Paquet source : exonerate ]
Paquet : exonerate (2.4.0-3)
Liens pour exonerate
Ressources Trisquel :
Télécharger le paquet source exonerate :
Responsable :
Original Maintainers:
- Debian Med Packaging Team (Archive du courrier électronique)
- Steffen Moeller
- Charles Plessy
- Andreas Tille
Ressources externes :
- Page d'accueil [www.ebi.ac.uk]
Paquets similaires :
generic tool for pairwise sequence comparison
Exonerate allows you to align sequences using a many alignment models, using either exhaustive dynamic programming, or a variety of heuristics. Much of the functionality of the Wise dynamic programming suite was reimplemented in C for better efficiency. Exonerate is an intrinsic component of the building of the Ensembl genome databases, providing similarity scores between RNA and DNA sequences and thus determining splice variants and coding sequences in general.
An In-silico PCR Experiment Simulation System (see the ipcress man page) is packaged with exonerate.
This package also comes with a selection of utilities for performing simple manipulations quickly on fasta files beyond 2Gb
Autres paquets associés à exonerate
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- dep: libc6 (>= 2.14) [amd64]
- GNU C Library: Shared libraries
un paquet virtuel est également fourni par libc6-udeb
- dep: libc6 (>= 2.7) [i386]
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- dep: libglib2.0-0 (>= 2.24.0)
- GLib library of C routines
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- sug: wise
- comparison of biopolymers, like DNA and protein sequences
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- enh: bioperl-run
- BioPerl wrappers: scripts
Télécharger exonerate
| Architecture | Taille du paquet | Espace occupé une fois installé | Fichiers |
|---|---|---|---|
| amd64 | 1 569,2 ko | 8573 ko | [liste des fichiers] |
| i386 | 1 719,5 ko | 9096 ko | [liste des fichiers] |