Paquet : mummer (3.23+dfsg-3)
Liens pour mummer
Ressources Trisquel :
Télécharger le paquet source mummer :
Responsable :
Original Maintainers:
- Debian Med Packaging Team (Archive du courrier électronique)
- Steffen Moeller
- Andreas Tille
- Charles Plessy
Ressources externes :
- Page d'accueil [mummer.sourceforge.net]
Paquets similaires :
Efficient sequence alignment of full genomes
MUMmer is a system for rapidly aligning entire genomes, whether in complete or draft form. For example, MUMmer 3.0 can find all 20-basepair or longer exact matches between a pair of 5-megabase genomes in 13.7 seconds, using 78 MB of memory, on a 2.4 GHz Linux desktop computer. MUMmer can also align incomplete genomes; it handles the 100s or 1000s of contigs from a shotgun sequencing project with ease, and will align them to another set of contigs or a genome using the NUCmer program included with the system. If the species are too divergent for DNA sequence alignment to detect similarity, then the PROmer program can generate alignments based upon the six-frame translations of both input sequences.
Autres paquets associés à mummer
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- dep: gawk
- GNU awk, a pattern scanning and processing language
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- dep: libc6 (>= 2.14) [amd64]
- GNU C Library: Shared libraries
un paquet virtuel est également fourni par libc6-udeb
- dep: libc6 (>= 2.7) [i386]
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- dep: libgcc1 (>= 1:3.0)
- GCC support library
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- dep: libstdc++6 (>= 5.2)
- GNU Standard C++ Library v3
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- dep: perl
- Larry Wall's Practical Extraction and Report Language
Télécharger mummer
| Architecture | Taille du paquet | Espace occupé une fois installé | Fichiers |
|---|---|---|---|
| amd64 | 792,3 ko | 1922 ko | [liste des fichiers] |
| i386 | 795,8 ko | 1901 ko | [liste des fichiers] |