Paquet : murasaki-mpi (1.68.6-6build5)
Liens pour murasaki-mpi
Ressources Trisquel :
Télécharger le paquet source murasaki :
Responsable :
Original Maintainers:
- Debian Med Packaging Team (Archive du courrier électronique)
- Andreas Tille
Ressources externes :
- Page d'accueil [murasaki.dna.bio.keio.ac.jp]
Paquets similaires :
homology detection tool across multiple large genomes (MPI-version)
Murasaki is a scalable and fast, language theory-based homology detection tool across multiple large genomes. It enable whole-genome scale multiple genome global alignments. Supports unlimited length gapped-seed patterns and unique TF-IDF based filtering.
Murasaki is an anchor alignment software, which is
* exteremely fast (17 CPU hours for whole Human x Mouse genome (with 40 nodes: 52 wall minutes)) * scalable (Arbitrarily parallelizable across multiple nodes using MPI. Even a single node with 16GB of ram can handle over 1Gbp of sequence.) * unlimited pattern length * repeat tolerant * intelligent noise reduction
This package provides the MPI-enabled binary for murasaki. While this will speed up operation on multi-processor machines it will slow down on a single processor.
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Télécharger murasaki-mpi
Architecture | Taille du paquet | Espace occupé une fois installé | Fichiers |
---|---|---|---|
amd64 | 608,0 ko | 4035 ko | [liste des fichiers] |
i386 | 617,0 ko | 3905 ko | [liste des fichiers] |