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[ Paquet source : smrtanalysis ]
Paquet : smrtanalysis (0~20161126)
Liens pour smrtanalysis
Ressources Trisquel :
Télécharger le paquet source smrtanalysis :
Responsable :
Original Maintainers:
- Debian Med Packaging Team (Archive du courrier électronique)
- Afif Elghraoui
Ressources externes :
- Page d'accueil [www.pacb.com]
Paquets similaires :
software suite for single molecule, real-time sequencing
SMRT® Analysis is a powerful, open-source bioinformatics software suite available for analysis of DNA sequencing data from Pacific Biosciences’ SMRT technology. Users can choose from a variety of analysis protocols that utilize PacBio® and third-party tools. Analysis protocols include de novo genome assembly, cDNA mapping, DNA base-modification detection, and long-amplicon analysis to determine phased consensus sequences.
This is a metapackage that depends on the components of SMRT Analysis.
Autres paquets associés à smrtanalysis
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- dep: blasr
- mapping single-molecule sequencing reads
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- dep: falcon
- diploid-aware genome assembly of single-molecule sequencing reads
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- dep: kineticstools
- detection of DNA modifications
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- dep: pbalign
- map Pacific Biosciences reads to reference DNA sequences
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- dep: pbbamtools
- processing Pacific Biosciences binary alignment/map files
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- dep: pbbarcode
- annotate PacBio sequencing reads with barcode information
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- dep: pbdagcon
- sequence consensus using directed acyclic graphs
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- dep: pbgenomicconsensus
- Pacific Biosciences variant and consensus caller
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- dep: pbh5tools
- tools for manipulating Pacific Biosciences HDF5 files
Télécharger smrtanalysis
| Architecture | Taille du paquet | Espace occupé une fois installé | Fichiers |
|---|---|---|---|
| all | 2,5 ko | 9 ko | [liste des fichiers] |