[ Paquet source : srst2 ]
Paquet : srst2 (0.2.0-5)
Liens pour srst2
Ressources Trisquel :
Télécharger le paquet source srst2 :
Responsable :
Original Maintainers:
- Debian Med Packaging Team (Archive du courrier électronique)
- Andreas Tille
Ressources externes :
- Page d'accueil [katholt.github.io]
Paquets similaires :
Short Read Sequence Typing for Bacterial Pathogens
This program is designed to take Illumina sequence data, a MLST database and/or a database of gene sequences (e.g. resistance genes, virulence genes, etc) and report the presence of STs and/or reference genes.
Autres paquets associés à srst2
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- dep: bowtie2
- ultrafast memory-efficient short read aligner
-
- dep: cd-hit
- suite of programs designed to quickly group sequences
-
- dep: python
- interactive high-level object-oriented language (default version)
-
- dep: python-biopython
- Python library for bioinformatics (implemented in Python 2)
-
- dep: python-scipy
- scientific tools for Python
-
- dep: samtools
- processing sequence alignments in SAM and BAM formats
-
- rec: python-rpy2
- Python 2 interface to the GNU R language and environment (version 2.8)
Télécharger srst2
| Architecture | Taille du paquet | Espace occupé une fois installé | Fichiers |
|---|---|---|---|
| amd64 | 59,1 ko | 258 ko | [liste des fichiers] |